Intro to neuroimaging
Useful resources
- Jody Culham fMRI 4 Newbies http://www.fmri4newbies.com/
- Great Youtube tutorial channel
- NITRC https://www.nitrc.org/
- an online resource/database of links to everything neuroimaging
- Freesurfer wiki
- an extensive set of tutorials on everything freesurfer)
- CIVET
- MAGeT Brain
- The FSL wiki
- Connectome Workbench tutorial
- ciftify github repo
- tools written by Erin W Dickie (me!) to make working on the surface (cifti files) easier
- epitome github repo
- a tool written to help you build bash pipelines for fMRI anaylsis
- Nilearn webpage
- python package for machine learning that make very pretty plots
- has an extensive set of online tutorials so it’s pretty easy to get started
- Nipype webpage
- python package for building neuroimaging analysis workflows
- also has an extensive set of tutorials to follow